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Spells with fire icon: "Fire" is targetted aoe rather than Single target.
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Spells with healing Icon, Pack regen/chloro are GroupV2 and shifted differently than the others.
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Spells with Boot Icon top, wolf Icon bottom Treeform did not have wolf icon and is shifted to blank as well. Share Wolf Form (group v2) is shifted differently
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Self Gates are in the correct positioning, group gates are not, if that helps to give a point of reference.
Pattern:
It looks like the spell icons have been shifted in a consistent pattern out of their intended places.
All spell icons of the same type are shifted to a new icon of the same type, the shift variance is determined by the spell's targetting behavior:
Groupv2 are shifted further, Targetted aoe are shifted differently than Groupv2, Self Only are shifted differently than the others, etc, can't test if pbaoe are shifted differently than groupv2 with my current characters.