The muffin quest counteracts some (maybe all?) of the faction issues, so you'll at least be able to hang out in Kelethin again. My Tunare bard ruined her Tunare faction soon after going x-team, and it seemed completely appropriate so I never bothered fixing it. It is nice being non-KoS in PoG, especially as classes like bard and cleric. Can help a lot with CRs and stuff.
If you have a RP reason for not killing stuff in PoG, then please don't do it! It's not worth it imo.
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“Smile, breathe, and go slowly.” 
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